Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin | EC382_RS25585 | Not Available | Positive | 5281389 - 5281766 | 14281.1 |
| hypothetical protein | EC382_RS25590 | Not Available | Positive | 5281763 - 5282003 | 8525.16 |
| lipopolysaccharide core heptose(ii) kinase rfay | EC382_RS25595 | Not Available | Positive | 5283318 - 5283986 | 26016.9 |
| glycosyltransferase family 8 protein | EC382_RS25600 | Not Available | Positive | 5284011 - 5284603 | 22977.3 |
| ompa family protein | EC382_RS25610 | Not Available | Positive | 5285851 - 5287029 | 43680.8 |
| duf1778 domain-containing protein | EC382_RS25615 | Not Available | Positive | 5287352 - 5287633 | 10547.7 |
| gnat family n-acetyltransferase | EC382_RS25620 | Not Available | Positive | 5287639 - 5288127 | 18021.8 |
| phage tail protein | EC382_RS25625 | Not Available | Positive | 5288332 - 5289012 | 23918.8 |
| phage minor tail protein g | EC382_RS25630 | Not Available | Positive | 5289028 - 5289450 | 15754.5 |
| phage tail assembly protein t | EC382_RS25635 | Not Available | Positive | 5289477 - 5289568 | 3694.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





