Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EC382_RS25375 | Not Available | Positive | 5254581 - 5254823 | 9148.75 |
| tolc family protein | EC382_RS25385 | Not Available | Positive | 5255241 - 5256509 | 47676.4 |
| abc transporter | EC382_RS25390 | Not Available | Positive | 5256514 - 5256683 | 6128.24 |
| iron abc transporter permease | EC382_RS25395 | Not Available | Negative | 5256684 - 5258190 | 54424.5 |
| duf987 domain-containing protein | EC382_RS25400 | Not Available | Positive | 5258299 - 5258520 | 8392.16 |
| type iv toxin-antitoxin system yeeu family antitoxin | EC382_RS25405 | Not Available | Positive | 5258595 - 5258963 | 13621.1 |
| toxin | EC382_RS25410 | Not Available | Positive | 5259053 - 5259430 | 14140.9 |
| hypothetical protein | EC382_RS25415 | Not Available | Positive | 5259427 - 5259677 | 8965.69 |
| hypothetical protein | EC382_RS25420 | Not Available | Negative | 5259823 - 5260446 | 24027.4 |
| rhs repeat-associated core domain-containing protein | EC382_RS25425 | Not Available | Negative | 5260497 - 5261159 | 24207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





