Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar-binding protein | EC382_RS25315 | Not Available | Negative | 5244205 - 5244421 | 8160.11 |
| rhs repeat protein | EC382_RS25320 | Not Available | Positive | 5244389 - 5245231 | 31043.6 |
| hypothetical protein | EC382_RS25325 | Not Available | Positive | 5245249 - 5245656 | 15867.2 |
| icmf | EC382_RS25330 | Not Available | Negative | 5245812 - 5246858 | 40013.9 |
| type vi secretion protein | EC382_RS25335 | Not Available | Negative | 5246851 - 5247411 | 20418.4 |
| is110 family transposase | EC382_RS25340 | Not Available | Negative | 5247684 - 5248688 | 37139.4 |
| protein rep | EC382_RS25350 | Not Available | Negative | 5249158 - 5250156 | 38403.9 |
| hemolysin activation protein | EC382_RS25355 | Not Available | Positive | 5250997 - 5251146 | 5783.99 |
| inovirus gp2 family protein | EC382_RS25360 | Not Available | Positive | 5251966 - 5252117 | 5859.09 |
| rhs repeat-associated core domain-containing protein | EC382_RS25370 | Not Available | Positive | 5253654 - 5254408 | 27720.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





