Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | EC382_RS25260 | Not Available | Negative | 5237143 - 5237433 | 10724.8 |
| phage tail assembly protein t | EC382_RS25265 | Not Available | Positive | 5237434 - 5237590 | 5476.27 |
| phage tail tape measure protein | EC382_RS25270 | Not Available | Positive | 5237634 - 5239163 | 54437.4 |
| duf4406 domain-containing protein | EC382_RS25275 | Not Available | Negative | 5239188 - 5239487 | 11113.3 |
| anr family transcriptional regulator | EC382_RS25280 | Not Available | Negative | 5239484 - 5239699 | 8665.13 |
| phage antirepressor ant | EC382_RS25285 | Not Available | Negative | 5239752 - 5240519 | 29801.8 |
| is200/is605 family element transposase accessory protein tnpb | EC382_RS25290 | Not Available | Negative | 5240906 - 5242114 | 45691.1 |
| hypothetical protein | EC382_RS25300 | Not Available | Positive | 5242591 - 5243234 | 22479.9 |
| hypothetical protein | EC382_RS25305 | Not Available | Positive | 5243234 - 5243611 | 14067.7 |
| isas1 family transposase | EC382_RS25310 | Not Available | Positive | 5244080 - 5244204 | 4707.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





