Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat protein | EC382_RS25040 | Not Available | Positive | 5198461 - 5199137 | 25552.1 |
| hypothetical protein | EC382_RS25045 | Not Available | Positive | 5199134 - 5199703 | 21895.4 |
| hypothetical protein | EC382_RS25050 | Not Available | Positive | 5199974 - 5200174 | 7583.2 |
| type iv secretion protein rhs | EC382_RS25055 | Not Available | Positive | 5200690 - 5201638 | 35996.7 |
| hypothetical protein | EC382_RS25060 | Not Available | Positive | 5201640 - 5202005 | 14533.3 |
| hypothetical protein | EC382_RS25065 | Not Available | Positive | 5202310 - 5202747 | 16546.6 |
| lysr family transcriptional regulator | EC382_RS25070 | Not Available | Positive | 5203195 - 5204106 | 34510.6 |
| gtpase family protein | EC382_RS25080 | Not Available | Positive | 5205088 - 5205755 | 25160.0 |
| autotransporter adhesin ag43 | EC382_RS25085 | Not Available | Positive | 5206128 - 5207170 | 35465.2 |
| site-specific integrase | EC382_RS25090 | Not Available | Positive | 5207285 - 5208532 | 47452.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





