Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrating conjugative element protein | EC382_RS24985 | Not Available | Positive | 5189379 - 5190800 | 50113.8 |
| hypothetical protein | EC382_RS24990 | Not Available | Positive | 5190805 - 5191146 | 13293.5 |
| conjugal transfer protein trag | EC382_RS24995 | Not Available | Positive | 5191153 - 5191511 | 13206.1 |
| cpbp family intramembrane metalloprotease | EC382_RS25000 | Not Available | Negative | 5191598 - 5192284 | 26332.2 |
| hypothetical protein | EC382_RS25005 | Not Available | Negative | 5192382 - 5192840 | 18015.4 |
| hypothetical protein | EC382_RS25010 | Not Available | Positive | 5193298 - 5193807 | 19106.1 |
| tyrosine-type recombinase/integrase | EC382_RS25015 | Not Available | Positive | 5194047 - 5195231 | 45355.8 |
| type vi secretion system protein tssa | EC382_RS25025 | Not Available | Positive | 5196216 - 5196947 | 27389.8 |
| type vi secretion protein | EC382_RS25030 | Not Available | Positive | 5196949 - 5197641 | 26830.4 |
| type vi secretion system baseplate subunit tssf | EC382_RS25035 | Not Available | Positive | 5197649 - 5198460 | 30358.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





