Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii restriction endonuclease subunit r | EC382_RS24935 | Not Available | Positive | 5178447 - 5178950 | 19161.7 |
| myo-inositol utilization transcriptional regulator iolr | EC382_RS24940 | Not Available | Positive | 5179419 - 5180252 | 30918.1 |
| myo-inositol import mfs transporter iolt1 | EC382_RS24945 | Not Available | Negative | 5180305 - 5181531 | 46354.8 |
| phage tail protein | EC382_RS24950 | Not Available | Negative | 5181532 - 5183223 | 54869.5 |
| ail/lom family outer membrane beta-barrel protein | EC382_RS24955 | Not Available | Negative | 5183288 - 5183887 | 21782.2 |
| nadp-dependent phosphogluconate dehydrogenase | EC382_RS24960 | Not Available | Positive | 5184692 - 5186098 | 51380.1 |
| type vi secretion system tip protein vgrg | EC382_RS24965 | Not Available | Negative | 5186632 - 5187929 | 49106.2 |
| hypothetical protein | EC382_RS24970 | Not Available | Positive | 5187976 - 5188185 | 7899.58 |
| type iv secretion protein rhs | EC382_RS24975 | Not Available | Negative | 5188452 - 5189018 | 21946.2 |
| tigr03756 family integrating conjugative element protein | EC382_RS24980 | Not Available | Positive | 5189114 - 5189365 | 9199.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





