Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpa family transcriptional regulator | EC382_RS24885 | Not Available | Negative | 5168950 - 5169228 | 10797.3 |
| hemolysin activation protein | EC382_RS24890 | Not Available | Positive | 5169908 - 5170057 | 5701.9 |
| inovirus gp2 family protein | EC382_RS24895 | Not Available | Positive | 5170785 - 5170907 | 4974.06 |
| tigr03746 family integrating conjugative element protein | EC382_RS24900 | Not Available | Positive | 5170908 - 5171553 | 24267.8 |
| tigr03749 family integrating conjugative element protein | EC382_RS24905 | Not Available | Positive | 5171553 - 5172461 | 32559.5 |
| tigr03752 family integrating conjugative element protein | EC382_RS24910 | Not Available | Positive | 5172451 - 5173649 | 41748.7 |
| glutamate--trna ligase | EC382_RS24915 | Not Available | Positive | 5173907 - 5175322 | 53774.6 |
| putative dna-binding transcriptional regulator | EC382_RS24920 | Not Available | Negative | 5175374 - 5175745 | 13983.8 |
| putative dna-binding transcriptional regulator | EC382_RS24925 | Not Available | Negative | 5175768 - 5176112 | 12720.4 |
| n-6 dna methylase | EC382_RS24930 | Not Available | Positive | 5176435 - 5178396 | 73323.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





