Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EC382_RS24775 | Not Available | Positive | 5150631 - 5150951 | 12135.4 |
| hypothetical protein | EC382_RS24790 | Not Available | Positive | 5152846 - 5153172 | 12534.1 |
| dotu family type iv/vi secretion system protein | EC382_RS24795 | Not Available | Negative | 5153317 - 5153970 | 24518.3 |
| type vi secretion system baseplate subunit tssk | EC382_RS24800 | Not Available | Negative | 5153967 - 5155304 | 49891.2 |
| type vi secretion system contractile sheath large subunit | EC382_RS24805 | Not Available | Negative | 5155320 - 5156545 | 46128.9 |
| subtilase cytotoxin subunit b | EC382_RS24810 | Not Available | Positive | 5156546 - 5156641 | 3256.89 |
| sialate o-acetylesterase | EC382_RS24815 | Not Available | Negative | 5156956 - 5157942 | 37487.0 |
| transcriptional regulator nanr | EC382_RS24820 | Not Available | Positive | 5158042 - 5158776 | 28205.0 |
| alpha/beta hydrolase | EC382_RS24825 | Not Available | Negative | 5158812 - 5159675 | 32036.2 |
| hypothetical protein | EC382_RS24830 | Not Available | Negative | 5159729 - 5160112 | 14523.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





