Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence element accessory protein tnpb | EC382_RS24670 | Not Available | Positive | 5133863 - 5134210 | 12771.9 |
| is66-like element isec8 family transposase | EC382_RS24675 | Not Available | Positive | 5134260 - 5135798 | 57684.1 |
| transposase | EC382_RS24685 | Not Available | Negative | 5135953 - 5136140 | 7594.45 |
| duf2726 domain-containing protein | EC382_RS24690 | Not Available | Negative | 5136271 - 5138439 | 82433.9 |
| tail assembly protein | EC382_RS24695 | Not Available | Negative | 5139680 - 5140083 | 14001.2 |
| phage tail protein | EC382_RS24700 | Not Available | Negative | 5140020 - 5140763 | 28321.4 |
| phage minor tail protein l | EC382_RS24705 | Not Available | Negative | 5140768 - 5141466 | 25644.9 |
| phage tail protein | EC382_RS24710 | Not Available | Negative | 5141466 - 5141795 | 12503.0 |
| phage tail tape measure protein | EC382_RS24715 | Not Available | Negative | 5141792 - 5143132 | 48298.8 |
| holin | EC382_RS24720 | Not Available | Positive | 5143204 - 5143419 | 8054.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





