Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor irea | EC382_RS24455 | Not Available | Positive | 5103081 - 5103850 | 27548.6 |
| elongation factor tu | EC382_RS24460 | Not Available | Negative | 5103851 - 5104151 | 10893.8 |
| Trna-thr | Not Available | Not Available | Positive | 5104266 - 5104341 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5104348 - 5104422 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 5104539 - 5104623 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 5104632 - 5104707 | Not Available |
| type i pantothenate kinase | EC382_RS24485 | Not Available | Positive | 5105069 - 5106019 | 36361.8 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | EC382_RS24490 | Not Available | Negative | 5106048 - 5107013 | 35301.1 |
| udp-n-acetylmuramate dehydrogenase | EC382_RS24495 | Not Available | Negative | 5107010 - 5108038 | 37915.2 |
| hypothetical protein | EC382_RS24500 | Not Available | Negative | 5108160 - 5108546 | 14669.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





