Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | EC382_RS24380 | Not Available | Positive | 5083651 - 5083851 | 7845.54 |
| tyrosine-type recombinase/integrase | EC382_RS24385 | Not Available | Negative | 5083848 - 5085245 | 52902.6 |
| m20 family metallo-hydrolase | EC382_RS24390 | Not Available | Negative | 5086552 - 5087868 | 47932.4 |
| anaerobic c4-dicarboxylate transporter dcuc | EC382_RS24395 | Not Available | Negative | 5087881 - 5089152 | 44225.3 |
| lysr family transcriptional regulator | EC382_RS24400 | Not Available | Positive | 5089288 - 5090205 | 34908.0 |
| iron abc transporter permease | EC382_RS24405 | Not Available | Positive | 5090307 - 5091916 | 58314.4 |
| ferric abc transporter atp-binding protein | EC382_RS24410 | Not Available | Positive | 5091928 - 5092974 | 39203.1 |
| dcrb-related protein | EC382_RS24425 | Not Available | Negative | 5098507 - 5098968 | 17319.4 |
| hypothetical protein | EC382_RS24430 | Not Available | Negative | 5098996 - 5099529 | 19166.7 |
| substrate-binding domain-containing protein | EC382_RS24435 | Not Available | Positive | 5099530 - 5099897 | 13559.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





