Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb-like nuclease domain-containing protein | EC382_RS24330 | Not Available | Negative | 5074402 - 5075031 | 23972.9 |
| hypothetical protein | EC382_RS24335 | Not Available | Positive | 5075311 - 5075952 | 23462.4 |
| hypothetical protein | EC382_RS24340 | Not Available | Positive | 5075949 - 5076176 | 8810.87 |
| type vi secretion system tip protein vgrg | EC382_RS24345 | Not Available | Positive | 5076255 - 5078774 | 91863.9 |
| duf2235 domain-containing protein | EC382_RS24350 | Not Available | Positive | 5078771 - 5080402 | 60350.7 |
| vrr-nuc domain-containing protein | EC382_RS24355 | Not Available | Positive | 5080403 - 5080615 | 7690.56 |
| arc family dna-binding protein | EC382_RS24360 | Not Available | Positive | 5080612 - 5080788 | 6808.0 |
| arc family dna-binding protein | EC382_RS24365 | Not Available | Negative | 5080757 - 5081086 | 13053.8 |
| dna-binding protein | EC382_RS24370 | Not Available | Positive | 5081481 - 5082215 | 27422.9 |
| dead/deah box helicase | EC382_RS24375 | Not Available | Positive | 5082260 - 5083654 | 52109.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





