Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleoside-diphosphate reductase subunit alpha | EC382_RS23850 | Not Available | Negative | 4978289 - 4980574 | 85722.9 |
| colanic acid biosynthesis pyruvyl transferase wcak | EC382_RS23855 | Not Available | Positive | 4981127 - 4982407 | 47304.4 |
| colanic acid biosynthesis glycosyltransferase wcal | EC382_RS23860 | Not Available | Positive | 4982404 - 4983624 | 45310.2 |
| colanic acid biosynthesis protein wcam | EC382_RS23865 | Not Available | Positive | 4983635 - 4985029 | 51277.7 |
| sdr family oxidoreductase | EC382_RS23870 | Not Available | Positive | 4985187 - 4986182 | 37160.3 |
| utp--glucose-1-phosphate uridylyltransferase galf | EC382_RS23875 | Not Available | Positive | 4986425 - 4987312 | 32713.2 |
| glycosyltransferase | EC382_RS23880 | Not Available | Positive | 4987482 - 4988192 | 27636.2 |
| o27 family o-antigen polymerase | EC382_RS23885 | Not Available | Positive | 4988225 - 4989125 | 35104.8 |
| peptidase domain-containing abc transporter | EC382_RS23890 | Not Available | Positive | 4989126 - 4990872 | 65020.0 |
| hypothetical protein | EC382_RS23895 | Not Available | Negative | 4991059 - 4991376 | 10549.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





