Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator yidz | EC382_RS23750 | Not Available | Negative | 4955788 - 4956747 | 36833.8 |
| multidrug efflux mfs transporter mdtl | EC382_RS23755 | Not Available | Negative | 4956722 - 4957897 | 41509.2 |
| low affinity tryptophan permease tnab | EC382_RS23760 | Not Available | Negative | 4958029 - 4959276 | 45227.3 |
| tryptophanase | EC382_RS23765 | Not Available | Negative | 4959367 - 4960656 | 48255.9 |
| tryptophanase leader peptide | EC382_RS23770 | Not Available | Negative | 4960877 - 4960951 | 2894.56 |
| shet2/espl2 family type iii secretion system effector toxin | EC382_RS23775 | Not Available | Positive | 4961351 - 4962512 | 43076.8 |
| glutathione s-transferase | EC382_RS23780 | Not Available | Positive | 4962729 - 4963337 | 22546.3 |
| l-seryl-trna(sec) selenium transferase | EC382_RS23785 | Not Available | Positive | 4963435 - 4964826 | 50610.2 |
| selenocysteine-specific translation elongation factor | EC382_RS23790 | Not Available | Positive | 4964823 - 4966667 | 68875.5 |
| l-threonine dehydrogenase | EC382_RS23795 | Not Available | Positive | 4966857 - 4968008 | 40379.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





