Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type lysozyme inhibitor | EC382_RS00585 | Not Available | Negative | 128925 - 129254 | 12590.3 |
| anhydro-n-acetylmuramic acid kinase | EC382_RS00590 | Not Available | Negative | 129352 - 130461 | 39526.7 |
| outer membrane lipoprotein slyb | EC382_RS00595 | Not Available | Positive | 130735 - 131202 | 15602.7 |
| transcriptional regulator slya | EC382_RS00600 | Not Available | Negative | 131249 - 131683 | 16354.0 |
| duf1656 domain-containing protein | EC382_RS00605 | Not Available | Positive | 131884 - 132120 | 8891.33 |
| hlyd family secretion protein | EC382_RS00610 | Not Available | Positive | 132123 - 132980 | 31587.7 |
| fusc family protein | EC382_RS00615 | Not Available | Positive | 132980 - 134992 | 75271.0 |
| superoxide dismutase | EC382_RS00620 | Not Available | Negative | 134993 - 135514 | 17682.0 |
| aldo/keto reductase family oxidoreductase | EC382_RS00625 | Not Available | Negative | 135595 - 136491 | 33677.6 |
| duf1289 domain-containing protein | EC382_RS00630 | Not Available | Negative | 136540 - 136779 | 9359.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





