Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine protease inhibitor ecotin | EC382_RS23650 | Not Available | Negative | 4939980 - 4940468 | 18166.0 |
| hypothetical protein | EC382_RS23655 | Not Available | Negative | 4940602 - 4940766 | 6263.71 |
| ferredoxin-type protein napf | EC382_RS23660 | Not Available | Positive | 4940875 - 4941369 | 18048.3 |
| chaperone napd | EC382_RS23665 | Not Available | Positive | 4941359 - 4941622 | 9408.93 |
| periplasmic nitrate reductase subunit alpha | EC382_RS23670 | Not Available | Positive | 4941619 - 4944105 | 93062.0 |
| ferredoxin-type protein napg | EC382_RS23675 | Not Available | Positive | 4944112 - 4944807 | 24926.1 |
| quinol dehydrogenase ferredoxin subunit naph | EC382_RS23680 | Not Available | Positive | 4944794 - 4945657 | 31861.3 |
| nitrate reductase cytochrome c-type subunit | EC382_RS23685 | Not Available | Positive | 4945654 - 4946103 | 16297.4 |
| cytochrome c-type protein napc | EC382_RS23690 | Not Available | Positive | 4946113 - 4946715 | 23101.8 |
| cytochrome c biogenesis heme-transporting atpase ccma | EC382_RS23695 | Not Available | Positive | 4946734 - 4947351 | 22922.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





