Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | EC382_RS23295 | Not Available | Negative | 4874340 - 4875128 | 29861.6 |
| zinc-binding alcohol dehydrogenase | EC382_RS23300 | Not Available | Negative | 4875146 - 4876198 | 38161.6 |
| carbohydrate abc transporter permease | EC382_RS23305 | Not Available | Negative | 4876229 - 4877071 | 31268.2 |
| sugar abc transporter permease | EC382_RS23310 | Not Available | Negative | 4877058 - 4877939 | 33227.3 |
| extracellular solute-binding protein | EC382_RS23315 | Not Available | Negative | 4877960 - 4878711 | 26781.9 |
| cation/acetate symporter actp | EC382_RS23320 | Not Available | Negative | 4879028 - 4880677 | 59259.8 |
| duf485 domain-containing protein | EC382_RS23325 | Not Available | Negative | 4880674 - 4880988 | 11658.3 |
| acetate--coa ligase | EC382_RS23330 | Not Available | Negative | 4881121 - 4883079 | 72069.4 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | EC382_RS23335 | Not Available | Positive | 4883472 - 4884908 | 53705.7 |
| cytochrome c nitrite reductase pentaheme subunit | EC382_RS23340 | Not Available | Positive | 4884953 - 4885519 | 20715.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





