Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate permease | EC382_RS23190 | Not Available | Negative | 4850349 - 4851905 | 54352.7 |
| peptide abc transporter substrate-binding protein | EC382_RS23195 | Not Available | Positive | 4852242 - 4852325 | 2789.44 |
| leucine-rich repeat domain-containing protein | EC382_RS23200 | Not Available | Positive | 4852326 - 4852485 | 6230.11 |
| nark family nitrate/nitrite mfs transporter | EC382_RS23205 | Not Available | Positive | 4852805 - 4854193 | 49984.1 |
| nitrate reductase subunit alpha | EC382_RS23210 | Not Available | Positive | 4854288 - 4858028 | 140175.0 |
| nitrate reductase subunit beta | EC382_RS23215 | Not Available | Positive | 4858025 - 4859569 | 58534.0 |
| nitrate reductase molybdenum cofactor assembly chaperone | EC382_RS23220 | Not Available | Positive | 4859569 - 4860264 | 26262.1 |
| respiratory nitrate reductase subunit gamma | EC382_RS23225 | Not Available | Positive | 4860261 - 4860941 | 26005.5 |
| phzf family isomerase | EC382_RS23230 | Not Available | Positive | 4861021 - 4861914 | 32281.7 |
| n-hydroxyarylamine o-acetyltransferase | EC382_RS23235 | Not Available | Negative | 4862010 - 4862855 | 32231.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





