Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxc | EC382_RS00535 | Not Available | Positive | 117683 - 120001 | 83685.1 |
| electron transport complex subunit rsxd | EC382_RS00540 | Not Available | Positive | 120002 - 121060 | 38160.4 |
| electron transport complex subunit rsxg | EC382_RS00545 | Not Available | Positive | 121064 - 121684 | 21913.1 |
| electron transport complex subunit e | EC382_RS00550 | Not Available | Positive | 121688 - 122383 | 24506.6 |
| endonuclease iii | EC382_RS00555 | Not Available | Positive | 122383 - 123018 | 23563.7 |
| dipeptide/tripeptide permease dtpa | EC382_RS00560 | Not Available | Positive | 123628 - 125130 | 54042.4 |
| glutathione transferase gsta | EC382_RS00565 | Not Available | Positive | 125236 - 125841 | 22869.6 |
| pyridoxal kinase pdxy | EC382_RS00570 | Not Available | Negative | 125885 - 126745 | 31192.8 |
| tyrosine--trna ligase | EC382_RS00575 | Not Available | Negative | 126807 - 128081 | 47529.6 |
| pyridoxamine 5'-phosphate oxidase | EC382_RS00580 | Not Available | Negative | 128210 - 128866 | 25546.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





