Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein pspa | EC382_RS22845 | Not Available | Negative | 4771138 - 4771806 | 25522.4 |
| phage shock protein operon transcriptional activator | EC382_RS22850 | Not Available | Positive | 4771973 - 4772950 | 37025.6 |
| 4-aminobutyrate transaminase | EC382_RS22855 | Not Available | Negative | 4773070 - 4774335 | 44720.5 |
| fad-binding oxidoreductase | EC382_RS22860 | Not Available | Negative | 4774373 - 4775653 | 47202.3 |
| aldehyde dehydrogenase puuc | EC382_RS22865 | Not Available | Negative | 4775655 - 4777142 | 53367.5 |
| hth-type transcriptional regulator puur | EC382_RS22870 | Not Available | Negative | 4777292 - 4777849 | 20092.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | EC382_RS22875 | Not Available | Negative | 4777876 - 4778640 | 28014.7 |
| glutamine synthetase | EC382_RS22880 | Not Available | Positive | 4778852 - 4780270 | 53196.2 |
| hypothetical protein | EC382_RS22885 | Not Available | Positive | 4780419 - 4780583 | 5971.24 |
| putrescine/proton symporter puup | EC382_RS22890 | Not Available | Positive | 4780573 - 4781958 | 50873.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





