Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin pemi | EC382_RS22745 | Not Available | Negative | 4750646 - 4750903 | 9279.11 |
| cpbp family intramembrane metalloprotease | EC382_RS22750 | Not Available | Negative | 4750996 - 4751649 | 24220.8 |
| colicin v secretion protein cvaa | EC382_RS22755 | Not Available | Positive | 4752317 - 4752582 | 9909.44 |
| inverse autotransporter adhesin eaex/air | EC382_RS22760 | Not Available | Negative | 4752583 - 4756389 | 136381.0 |
| purine ribonucleoside efflux pump nepi | EC382_RS22765 | Not Available | Negative | 4756591 - 4757775 | 41546.2 |
| type ii toxin-antitoxin system rele/pare family toxin | EC382_RS22770 | Not Available | Positive | 4758009 - 4758362 | 13456.2 |
| dna-binding transcriptional regulator | EC382_RS22775 | Not Available | Positive | 4758346 - 4758669 | 11625.2 |
| duf1198 domain-containing protein | EC382_RS22780 | Not Available | Negative | 4758785 - 4759237 | 17220.1 |
| ncs2 family permease | EC382_RS22785 | Not Available | Negative | 4759290 - 4760624 | 46998.6 |
| adenine deaminase | EC382_RS22790 | Not Available | Positive | 4760799 - 4762565 | 63748.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





