Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| incfii family plasmid replication initiator repa | EC382_RS22485 | Not Available | Negative | 4704027 - 4704884 | 32631.6 |
| repa leader peptide tap | EC382_RS22490 | Not Available | Negative | 4704877 - 4704951 | 2699.38 |
| replication regulatory protein repa | EC382_RS22495 | Not Available | Negative | 4705175 - 4705435 | 10038.3 |
| type i toxin-antitoxin system hok family toxin | EC382_RS22500 | Not Available | Negative | 4705719 - 4705868 | 5543.0 |
| acylphosphatase | EC382_RS22505 | Not Available | Positive | 4706024 - 4709101 | 108606.0 |
| hila family transcriptional regulator eila | EC382_RS22510 | Not Available | Negative | 4709151 - 4710848 | 63944.9 |
| ipad/sipd/sspd family type iii secretion system needle tip protein | EC382_RS22515 | Not Available | Negative | 4711051 - 4712400 | 50086.9 |
| hypothetical protein | EC382_RS22520 | Not Available | Negative | 4712444 - 4713595 | 43542.2 |
| yopb/ssec family type iii secretion system translocon subunit | EC382_RS22525 | Not Available | Negative | 4713608 - 4715389 | 63995.3 |
| hypothetical protein | EC382_RS22530 | Not Available | Negative | 4715445 - 4715627 | 6870.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





