Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin release lysis protein | EC382_RS22425 | Not Available | Positive | 4694893 - 4694970 | 2940.83 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EC382_RS22435 | Not Available | Positive | 4695665 - 4695889 | 8361.83 |
| type ii toxin-antitoxin system death-on-curing family toxin | EC382_RS22440 | Not Available | Positive | 4695886 - 4696272 | 14403.6 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EC382_RS22445 | Not Available | Positive | 4696792 - 4697046 | 9560.6 |
| type ii toxin-antitoxin system vapc family toxin | EC382_RS22450 | Not Available | Positive | 4697046 - 4697462 | 15569.0 |
| recombinase family protein | EC382_RS22460 | Not Available | Negative | 4698206 - 4698787 | 21507.2 |
| tn3 family transposase | EC382_RS22465 | Not Available | Positive | 4698944 - 4701982 | 117213.0 |
| ribbon-helix-helix protein, copg family | EC382_RS22470 | Not Available | Negative | 4702004 - 4702318 | 11527.9 |
| helix-turn-helix transcriptional regulator | EC382_RS22475 | Not Available | Negative | 4702501 - 4702782 | 11002.2 |
| type ii toxin-antitoxin system rele/pare family toxin | EC382_RS22480 | Not Available | Negative | 4702763 - 4703092 | 12537.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





