Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystine abc transporter permease | EC382_RS22170 | Not Available | Negative | 4637860 - 4638528 | 24802.7 |
| d-cysteine desulfhydrase | EC382_RS22175 | Not Available | Negative | 4638543 - 4639529 | 35183.5 |
| cystine abc transporter substrate-binding protein | EC382_RS22180 | Not Available | Negative | 4639634 - 4640434 | 28996.8 |
| flagella biosynthesis regulatory protein fliz | EC382_RS22185 | Not Available | Negative | 4640522 - 4641073 | 21559.9 |
| rna polymerase sigma factor flia | EC382_RS22190 | Not Available | Negative | 4641119 - 4641838 | 27549.8 |
| flagellin flic | EC382_RS22195 | Not Available | Negative | 4642158 - 4643870 | 58111.4 |
| flagellar filament capping protein flid | EC382_RS22200 | Not Available | Positive | 4644136 - 4645542 | 48486.1 |
| flagellar export chaperone flis | EC382_RS22205 | Not Available | Positive | 4645567 - 4645977 | 15020.1 |
| flagella biosynthesis regulatory protein flit | EC382_RS22210 | Not Available | Positive | 4645977 - 4646342 | 13829.6 |
| alpha-amylase | EC382_RS22215 | Not Available | Positive | 4646420 - 4647907 | 56603.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





