Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication terminus site-binding protein | EC382_RS00435 | Not Available | Positive | 95195 - 96124 | 35742.1 |
| class ii fumarate hydratase | EC382_RS00440 | Not Available | Negative | 96121 - 97524 | 50491.9 |
| fumarate hydratase | EC382_RS00445 | Not Available | Negative | 97667 - 99313 | 60302.0 |
| mannose-6-phosphate isomerase | EC382_RS00450 | Not Available | Positive | 99512 - 100687 | 42795.2 |
| ydga family protein | EC382_RS00455 | Not Available | Positive | 100788 - 102296 | 54710.2 |
| glucuronide uptake porin uidc | EC382_RS00460 | Not Available | Negative | 102341 - 103606 | 46620.2 |
| glucuronide transporter | EC382_RS00465 | Not Available | Negative | 103645 - 105018 | 49909.0 |
| beta-glucuronidase | EC382_RS00470 | Not Available | Negative | 105015 - 106826 | 68504.7 |
| tetr/acrr family transcriptional regulator | EC382_RS00475 | Not Available | Negative | 107217 - 107807 | 21800.5 |
| 7-alpha-hydroxysteroid dehydrogenase | EC382_RS00480 | Not Available | Negative | 108036 - 108803 | 26780.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





