Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ail/lom family outer membrane beta-barrel protein | EC382_RS21960 | Not Available | Negative | 4587706 - 4588440 | 26543.9 |
| hypothetical protein | EC382_RS21965 | Not Available | Negative | 4588531 - 4589148 | 23060.8 |
| hypothetical protein | EC382_RS21970 | Not Available | Negative | 4589154 - 4589432 | 10417.3 |
| host specificity protein j | EC382_RS21975 | Not Available | Negative | 4589447 - 4590715 | 45457.0 |
| hypothetical protein | EC382_RS21980 | Not Available | Negative | 4590712 - 4592337 | 58887.1 |
| mfs transporter | EC382_RS21985 | Not Available | Negative | 4592943 - 4594169 | 44703.9 |
| d-chiro-inositol-2-dehydrogenase iolg2 | EC382_RS21990 | Not Available | Negative | 4594242 - 4595264 | 38633.9 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | EC382_RS21995 | Not Available | Negative | 4595438 - 4597378 | 72328.6 |
| 5-dehydro-2-deoxygluconokinase | EC382_RS22000 | Not Available | Positive | 4597781 - 4599718 | 72092.2 |
| sugar phosphate isomerase/epimerase | EC382_RS22010 | Not Available | Negative | 4601533 - 4602366 | 31226.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





