Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspi | EC382_RS21860 | Not Available | Negative | 4558368 - 4558739 | 13619.3 |
| type ii secretion system minor pseudopilin gsph | EC382_RS21865 | Not Available | Negative | 4558736 - 4559299 | 21138.7 |
| type ii secretion system major pseudopilin gspg | EC382_RS21870 | Not Available | Negative | 4559303 - 4559758 | 16647.8 |
| type ii secretion system inner membrane protein gspf | EC382_RS21875 | Not Available | Negative | 4559775 - 4560998 | 44940.8 |
| type ii secretion system atpase gspe | EC382_RS21880 | Not Available | Negative | 4560998 - 4562491 | 55188.7 |
| type ii secretion system secretin gspd | EC382_RS21885 | Not Available | Negative | 4562491 - 4564551 | 74192.1 |
| type ii secretion system protein gspc | EC382_RS21890 | Not Available | Negative | 4564581 - 4565540 | 35850.5 |
| type ii secretion system pilot lipoprotein gsps-beta | EC382_RS21895 | Not Available | Negative | 4565558 - 4565968 | 14652.9 |
| prepilin peptidase | EC382_RS21900 | Not Available | Negative | 4566034 - 4566843 | 29540.0 |
| lipoprotein metalloprotease ssle | EC382_RS21905 | Not Available | Negative | 4567170 - 4571691 | 165902.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





