Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug/spermidine efflux smr transporter subunit mdtj | EC382_RS00385 | Not Available | Negative | 84072 - 84437 | 13115.7 |
| ai-2 transporter tqsa | EC382_RS00390 | Not Available | Positive | 84849 - 85883 | 37545.3 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | EC382_RS00395 | Not Available | Negative | 85908 - 87296 | 48726.0 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | EC382_RS00400 | Not Available | Negative | 87307 - 88839 | 54578.5 |
| duf1471 domain-containing protein | EC382_RS00405 | Not Available | Positive | 89363 - 90307 | 33874.9 |
| amino acid permease | EC382_RS00410 | Not Available | Positive | 90493 - 91875 | 49504.5 |
| dihydromonapterin reductase | EC382_RS00415 | Not Available | Positive | 91912 - 92634 | 26349.8 |
| glpm family protein | EC382_RS00420 | Not Available | Negative | 92631 - 92966 | 12323.8 |
| two-component system response regulator rsta | EC382_RS00425 | Not Available | Positive | 93095 - 93814 | 26705.4 |
| two-component system sensor histidine kinase rstb | EC382_RS00430 | Not Available | Positive | 93818 - 95119 | 49331.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





