Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel/cobalt efflux protein rcna | EC382_RS21325 | Not Available | Positive | 4464690 - 4465514 | 30415.2 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | EC382_RS21330 | Not Available | Positive | 4465733 - 4466071 | 12466.8 |
| putative fimbrial-like adhesin protein | EC382_RS21335 | Not Available | Negative | 4466153 - 4467187 | 36935.0 |
| fimbrial biogenesis outer membrane usher protein | EC382_RS21340 | Not Available | Negative | 4467201 - 4469681 | 92282.0 |
| fimbria/pilus periplasmic chaperone | EC382_RS21345 | Not Available | Negative | 4469697 - 4470371 | 24812.2 |
| yehe family protein | EC382_RS21355 | Not Available | Negative | 4471286 - 4471567 | 10164.1 |
| iron-sulfur cluster carrier protein apbc | EC382_RS21360 | Not Available | Negative | 4471829 - 4472938 | 39940.4 |
| methionine--trna ligase | EC382_RS21365 | Not Available | Positive | 4473070 - 4475103 | 76258.9 |
| wgr and duf4132 domain-containing protein | EC382_RS21370 | Not Available | Positive | 4475244 - 4479047 | 143074.0 |
| wgr and duf4132 domain-containing protein | EC382_RS21375 | Not Available | Positive | 4479060 - 4482092 | 113344.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





