Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcy family protein | EC382_RS21270 | Not Available | Positive | 4454515 - 4454748 | 8800.41 |
| dmt family transporter | EC382_RS21275 | Not Available | Negative | 4454749 - 4455198 | 15824.0 |
| l-methionine sulfoximine/l-methionine sulfone acetyltransferase | EC382_RS21280 | Not Available | Negative | 4455195 - 4455713 | 19249.7 |
| nadph-dependent curcumin/dihydrocurcumin reductase | EC382_RS21285 | Not Available | Positive | 4455894 - 4456931 | 37627.9 |
| gntr family transcriptional regulator | EC382_RS21290 | Not Available | Positive | 4457129 - 4457794 | 25225.1 |
| tonb-dependent receptor | EC382_RS21295 | Not Available | Negative | 4457830 - 4459932 | 77264.9 |
| ynce family protein | EC382_RS21300 | Not Available | Positive | 4460174 - 4461235 | 38686.2 |
| glutathione s-transferase family protein | EC382_RS21310 | Not Available | Positive | 4463117 - 4463734 | 23324.0 |
| ynch family protein | EC382_RS21315 | Not Available | Positive | 4463810 - 4464022 | 8264.63 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | EC382_RS21320 | Not Available | Negative | 4464297 - 4464569 | 10134.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





