Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body l-ring protein flgh | EC382_RS21170 | Not Available | Positive | 4435259 - 4435957 | 24616.9 |
| flagellar basal body p-ring protein flgi | EC382_RS21175 | Not Available | Positive | 4435969 - 4437066 | 38171.9 |
| flagellar assembly peptidoglycan hydrolase flgj | EC382_RS21180 | Not Available | Positive | 4437066 - 4438007 | 34477.1 |
| flagellar hook-associated protein flgk | EC382_RS21185 | Not Available | Positive | 4438073 - 4439716 | 58006.1 |
| flagellar hook-filament junction protein flgl | EC382_RS21190 | Not Available | Positive | 4439728 - 4440681 | 34196.8 |
| ribonuclease e | EC382_RS21195 | Not Available | Negative | 4440876 - 4441776 | 32461.8 |
| bene family transporter ydco | EC382_RS21200 | Not Available | Negative | 4441777 - 4442986 | 41984.6 |
| helix-turn-helix domain-containing protein | EC382_RS21205 | Not Available | Positive | 4443039 - 4443575 | 19754.5 |
| 23s rrna 5-hydroxycytidine c2501 synthase | EC382_RS21210 | Not Available | Positive | 4443648 - 4445609 | 72736.0 |
| yncj family protein | EC382_RS21215 | Not Available | Negative | 4445701 - 4445931 | 8709.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





