Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EC382_RS20970 | Not Available | Negative | 4397881 - 4398102 | 7452.14 |
| multidrug efflux rnd transporter permease subunit acrf | EC382_RS20975 | Not Available | Negative | 4398355 - 4401459 | 111443.0 |
| multidrug efflux rnd transporter periplasmic adaptor subunit acre | EC382_RS20980 | Not Available | Negative | 4401471 - 4402628 | 41320.0 |
| multidrug efflux transporter transcriptional repressor acrs | EC382_RS20985 | Not Available | Positive | 4403027 - 4403689 | 25199.7 |
| duf2556 domain-containing protein | EC382_RS20990 | Not Available | Negative | 4403692 - 4403871 | 7203.93 |
| adenine-specific dna-methyltransferase | EC382_RS20995 | Not Available | Negative | 4403955 - 4404839 | 33391.2 |
| dna-binding transcriptional regulator fis | EC382_RS21000 | Not Available | Negative | 4404925 - 4405221 | 11240.6 |
| trna dihydrouridine synthase dusb | EC382_RS21005 | Not Available | Negative | 4405247 - 4406212 | 35868.2 |
| 50s ribosomal protein l11 methyltransferase | EC382_RS21010 | Not Available | Negative | 4406541 - 4407422 | 31865.8 |
| sodium/pantothenate symporter | EC382_RS21015 | Not Available | Negative | 4407434 - 4408885 | 51734.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





