Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat proofreading chaperone dmsd | EC382_RS00335 | Not Available | Positive | 75440 - 76054 | 23442.0 |
| voltage-gated clc-type chloride channel clcb | EC382_RS00340 | Not Available | Positive | 76215 - 77507 | 45662.0 |
| atp-dependent dethiobiotin synthetase biod | EC382_RS00345 | Not Available | Negative | 77460 - 78155 | 24968.4 |
| dna-binding transcriptional repressor mlc | EC382_RS00350 | Not Available | Negative | 78280 - 79500 | 44292.7 |
| lysr family transcriptional regulator | EC382_RS00355 | Not Available | Negative | 79635 - 80528 | 33297.4 |
| mfs transporter | EC382_RS00360 | Not Available | Positive | 80635 - 81888 | 45246.2 |
| acid shock protein | EC382_RS00365 | Not Available | Positive | 82285 - 82620 | 11579.1 |
| hypothetical protein | EC382_RS00370 | Not Available | Positive | 82713 - 82796 | 3206.2 |
| serine protease | EC382_RS00375 | Not Available | Positive | 82896 - 83717 | 29250.6 |
| multidrug/spermidine efflux smr transporter subunit mdti | EC382_RS00380 | Not Available | Negative | 83756 - 84085 | 11720.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





