Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | EC382_RS20865 | Not Available | Positive | 4380526 - 4381146 | 23470.5 |
| dna-directed rna polymerase subunit alpha | EC382_RS20870 | Not Available | Positive | 4381172 - 4382161 | 36513.9 |
| 50s ribosomal protein l17 | EC382_RS20875 | Not Available | Positive | 4382202 - 4382585 | 14365.4 |
| duf1992 domain-containing protein | EC382_RS20880 | Not Available | Positive | 4382692 - 4383060 | 13973.6 |
| zn(2+)-responsive transcriptional regulator | EC382_RS20885 | Not Available | Positive | 4383071 - 4383496 | 16180.4 |
| alternative ribosome-rescue factor a | EC382_RS20890 | Not Available | Positive | 4383552 - 4383770 | 8199.92 |
| large-conductance mechanosensitive channel protein mscl | EC382_RS20895 | Not Available | Negative | 4383767 - 4384177 | 14956.7 |
| trk system potassium transporter trka | EC382_RS20900 | Not Available | Negative | 4384307 - 4385683 | 50370.8 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EC382_RS20905 | Not Available | Negative | 4385705 - 4386994 | 48393.3 |
| methionyl-trna formyltransferase | EC382_RS20910 | Not Available | Negative | 4387040 - 4387987 | 34114.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





