Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase era | EC382_RS20515 | Not Available | Negative | 4317676 - 4318581 | 33812.1 |
| ribonuclease iii | EC382_RS20520 | Not Available | Negative | 4318578 - 4319258 | 25551.6 |
| signal peptidase i | EC382_RS20525 | Not Available | Negative | 4319531 - 4320505 | 35948.3 |
| elongation factor 4 | EC382_RS20530 | Not Available | Negative | 4320521 - 4322320 | 66574.1 |
| soxr-reducing system protein rsec | EC382_RS20535 | Not Available | Negative | 4322518 - 4322997 | 16626.3 |
| sigma-e factor regulatory protein rseb | EC382_RS20540 | Not Available | Negative | 4322994 - 4323950 | 35751.8 |
| anti-sigma-e factor rsea | EC382_RS20545 | Not Available | Negative | 4323950 - 4324600 | 24322.8 |
| rna polymerase sigma factor rpoe | EC382_RS20550 | Not Available | Negative | 4324633 - 4325208 | 21697.0 |
| rpoe leader peptide rsed | EC382_RS20555 | Not Available | Negative | 4325205 - 4325360 | 6229.83 |
| l-aspartate oxidase | EC382_RS20560 | Not Available | Positive | 4325616 - 4327238 | 60260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





