Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator nagc | EC382_RS20465 | Not Available | Positive | 4310240 - 4311460 | 44544.0 |
| ribonucleotide monophosphatase nagd | EC382_RS20470 | Not Available | Positive | 4311508 - 4312260 | 27164.6 |
| asparagine synthase b | EC382_RS20475 | Not Available | Positive | 4312657 - 4314321 | 62678.3 |
| Trna-met | Not Available | Not Available | Positive | 4314701 - 4314777 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4314787 - 4314871 | Not Available |
| 4fe-4s dicluster ferredoxin yfhl | EC382_RS20490 | Not Available | Positive | 4314894 - 4315117 | 8400.93 |
| type i toxin-antitoxin system toxin shob | EC382_RS20495 | Not Available | Negative | 4315312 - 4315392 | 3075.16 |
| holo-acp synthase | EC382_RS20500 | Not Available | Negative | 4315813 - 4316193 | 14125.2 |
| pyridoxine 5'-phosphate synthase | EC382_RS20505 | Not Available | Negative | 4316193 - 4316924 | 26398.9 |
| dna repair protein reco | EC382_RS20510 | Not Available | Negative | 4316936 - 4317664 | 27392.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





