Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starvation-sensing protein rspa | EC382_RS00285 | Not Available | Negative | 64862 - 66076 | 45985.0 |
| ynfa family protein | EC382_RS00290 | Not Available | Negative | 66282 - 66608 | 11920.2 |
| duf1283 family protein | EC382_RS00295 | Not Available | Positive | 66743 - 67084 | 12973.4 |
| spermidine n1-acetyltransferase | EC382_RS00300 | Not Available | Positive | 67119 - 67679 | 21902.3 |
| ynfc family lipoprotein | EC382_RS00305 | Not Available | Negative | 67682 - 68392 | 26474.3 |
| duf1161 domain-containing protein | EC382_RS00310 | Not Available | Positive | 68500 - 68805 | 10491.3 |
| dimethyl sulfoxide reductase subunit a | EC382_RS00315 | Not Available | Positive | 69003 - 71429 | 89559.6 |
| dimethyl sulfoxide reductase subunit a | EC382_RS00320 | Not Available | Positive | 71490 - 73913 | 89991.1 |
| dimethylsulfoxide reductase subunit b | EC382_RS00325 | Not Available | Positive | 73924 - 74541 | 22752.9 |
| dimethyl sulfoxide reductase anchor subunit | EC382_RS00330 | Not Available | Positive | 74543 - 75397 | 30488.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





