Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybfa family protein | EC382_RS20365 | Not Available | Negative | 4288175 - 4288381 | 8275.0 |
| k(+)-transporting atpase subunit f | EC382_RS20370 | Not Available | Positive | 4288694 - 4288783 | 3084.01 |
| potassium-transporting atpase subunit kdpa | EC382_RS20375 | Not Available | Positive | 4288783 - 4290456 | 59113.5 |
| potassium-transporting atpase subunit kdpb | EC382_RS20380 | Not Available | Positive | 4290479 - 4292527 | 72215.5 |
| k(+)-transporting atpase subunit c | EC382_RS20385 | Not Available | Positive | 4292536 - 4293108 | 20338.4 |
| two-component system sensor histidine kinase kdbd | EC382_RS20390 | Not Available | Positive | 4293101 - 4295785 | 98697.1 |
| two-component system response regulator kdpe | EC382_RS20395 | Not Available | Positive | 4295782 - 4296459 | 25349.7 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | EC382_RS20400 | Not Available | Negative | 4296634 - 4298274 | 58382.2 |
| replication initiation negative regulator seqa | EC382_RS20405 | Not Available | Negative | 4298300 - 4298845 | 20316.6 |
| esterase | EC382_RS20410 | Not Available | Positive | 4299030 - 4299794 | 28480.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





