Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase dacd | EC382_RS20265 | Not Available | Negative | 4269480 - 4270646 | 43318.5 |
| exodeoxyribonuclease i | EC382_RS20270 | Not Available | Positive | 4270855 - 4272282 | 54502.7 |
| sulfurtransferase tusa family protein | EC382_RS20275 | Not Available | Negative | 4272325 - 4272552 | 8092.61 |
| transport protein yeee | EC382_RS20280 | Not Available | Negative | 4272566 - 4273624 | 38058.6 |
| putrescine/proton symporter plap | EC382_RS20285 | Not Available | Negative | 4273804 - 4275162 | 49540.5 |
| membrane protein yoei | EC382_RS20290 | Not Available | Negative | 4275152 - 4275214 | 2241.66 |
| lysr family transcriptional regulator | EC382_RS20295 | Not Available | Negative | 4275429 - 4276358 | 34202.1 |
| sdr family oxidoreductase | EC382_RS20300 | Not Available | Negative | 4276404 - 4277228 | 29681.7 |
| his operon leader peptide | EC382_RS20305 | Not Available | Positive | 4277655 - 4277705 | 2081.43 |
| atp phosphoribosyltransferase | EC382_RS20310 | Not Available | Positive | 4277851 - 4278750 | 33368.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





