Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase dgcz | EC382_RS00235 | Not Available | Negative | 54363 - 55253 | 33851.4 |
| ydei family stress tolerance ob fold protein | EC382_RS00240 | Not Available | Negative | 55507 - 55899 | 14121.9 |
| 2-oxo-tetronate isomerase | EC382_RS00245 | Not Available | Positive | 56175 - 56693 | 18265.8 |
| peptidyl-dipeptidase dcp | EC382_RS00250 | Not Available | Negative | 56738 - 58783 | 77505.8 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | EC382_RS00255 | Not Available | Positive | 58920 - 59666 | 27234.5 |
| gntr family transcriptional regulator | EC382_RS00260 | Not Available | Positive | 59755 - 60441 | 26566.7 |
| putative selenium delivery protein ydfz | EC382_RS00265 | Not Available | Positive | 60618 - 60821 | 7276.83 |
| mannitol dehydrogenase family protein | EC382_RS00270 | Not Available | Negative | 60856 - 62316 | 53737.4 |
| mhs family mfs transporter | EC382_RS00275 | Not Available | Negative | 62406 - 63773 | 49370.7 |
| zn-dependent oxidoreductase | EC382_RS00280 | Not Available | Negative | 63831 - 64850 | 36592.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





