Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system mrna interferase toxin yafq | EC382_RS19810 | Not Available | Positive | 4166576 - 4166854 | 10831.2 |
| murein l,d-transpeptidase | EC382_RS19815 | Not Available | Positive | 4167010 - 4167750 | 28022.8 |
| class ii glutamine amidotransferase | EC382_RS19820 | Not Available | Negative | 4167721 - 4168488 | 28610.1 |
| d-sedoheptulose 7-phosphate isomerase | EC382_RS19825 | Not Available | Negative | 4168694 - 4169272 | 20816.0 |
| acyl-coa dehydrogenase | EC382_RS19830 | Not Available | Positive | 4169512 - 4171956 | 89196.7 |
| c-lysozyme inhibitor | EC382_RS19835 | Not Available | Negative | 4171999 - 4172472 | 16873.2 |
| 2-oxoglutaramate amidase | EC382_RS19840 | Not Available | Positive | 4172626 - 4173396 | 28986.6 |
| oligoribonuclease | EC382_RS19850 | Not Available | Negative | 4173811 - 4174356 | 20816.8 |
| small ribosomal subunit biogenesis gtpase rsga | EC382_RS19855 | Not Available | Positive | 4174451 - 4175503 | 39181.5 |
| phosphatidylserine decarboxylase | EC382_RS19860 | Not Available | Positive | 4175600 - 4176568 | 35936.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





