Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketose 1,6-bisphosphate aldolase | EC382_RS19490 | Not Available | Positive | 4099405 - 4100265 | 31124.2 |
| carbohydrate kinase family protein | EC382_RS19495 | Not Available | Positive | 4100262 - 4101263 | 36819.2 |
| response regulator transcription factor | EC382_RS19500 | Not Available | Negative | 4101260 - 4101967 | 26161.2 |
| alkyl sulfatase yjcs | EC382_RS19505 | Not Available | Positive | 4102258 - 4104243 | 73219.0 |
| hypothetical protein | EC382_RS19510 | Not Available | Positive | 4104452 - 4104727 | 10301.2 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | EC382_RS19515 | Not Available | Positive | 4104746 - 4105777 | 36910.3 |
| multidrug efflux transporter permease subunit mdto | EC382_RS19520 | Not Available | Positive | 4105777 - 4107828 | 76200.2 |
| multidrug efflux transporter outer membrane subunit mdtp | EC382_RS19525 | Not Available | Positive | 4107825 - 4109291 | 53408.2 |
| formate dehydrogenase subunit alpha | EC382_RS19530 | Not Available | Positive | 4109489 - 4111636 | 79228.1 |
| sel1 repeat family protein | EC382_RS19535 | Not Available | Positive | 4111730 - 4112419 | 25080.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





