Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | EC382_RS19440 | Not Available | Positive | 4089477 - 4090613 | 42037.9 |
| ribose 1,5-bisphosphokinase | EC382_RS19445 | Not Available | Positive | 4090613 - 4091170 | 20588.6 |
| aminoalkylphosphonate n-acetyltransferase | EC382_RS19450 | Not Available | Positive | 4091157 - 4091591 | 16570.8 |
| phosphonate metabolism protein phnp | EC382_RS19455 | Not Available | Positive | 4091593 - 4092351 | 27928.3 |
| hypothetical protein | EC382_RS19460 | Not Available | Negative | 4092428 - 4092757 | 13485.3 |
| response regulator | EC382_RS19465 | Not Available | Negative | 4092826 - 4095087 | 82273.6 |
| sugar abc transporter atp-binding protein | EC382_RS19470 | Not Available | Positive | 4095201 - 4096721 | 55211.5 |
| ribose abc transporter permease | EC382_RS19475 | Not Available | Positive | 4096718 - 4097692 | 33989.8 |
| abc transporter substrate-binding protein | EC382_RS19480 | Not Available | Positive | 4097711 - 4098652 | 32790.5 |
| d-lyxose/d-mannose family sugar isomerase | EC382_RS19485 | Not Available | Positive | 4098707 - 4099390 | 25843.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





