Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter atp-binding protein | EC382_RS19390 | Not Available | Positive | 4081538 - 4082326 | 29555.6 |
| phosphonate abc transporter substrate-binding protein | EC382_RS19395 | Not Available | Positive | 4082351 - 4083367 | 37386.6 |
| phosphonate abc transporter, permease protein phne | EC382_RS19400 | Not Available | Positive | 4083473 - 4084252 | 28385.3 |
| phosphonate metabolism transcriptional regulator phnf | EC382_RS19405 | Not Available | Positive | 4084273 - 4084998 | 27593.0 |
| phosphonate c-p lyase system protein phng | EC382_RS19410 | Not Available | Positive | 4084999 - 4085451 | 16539.7 |
| phosphonate c-p lyase system protein phnh | EC382_RS19415 | Not Available | Positive | 4085448 - 4086032 | 20914.4 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | EC382_RS19420 | Not Available | Positive | 4086032 - 4087096 | 38975.1 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | EC382_RS19425 | Not Available | Positive | 4087089 - 4087934 | 31819.9 |
| phosphonate c-p lyase system protein phnk | EC382_RS19430 | Not Available | Positive | 4087931 - 4088689 | 27852.6 |
| phosphonate c-p lyase system protein phnl | EC382_RS19435 | Not Available | Positive | 4088800 - 4089480 | 24690.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





