Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | EC382_RS19225 | Not Available | Positive | 4053380 - 4054117 | 27830.9 |
| ribosome-associated translation inhibitor raia | EC382_RS19230 | Not Available | Positive | 4054388 - 4054729 | 12785.3 |
| hypothetical protein | EC382_RS19235 | Not Available | Positive | 4054833 - 4054880 | 1912.35 |
| bifunctional chorismate mutase/prephenate dehydratase | EC382_RS19240 | Not Available | Positive | 4054979 - 4056139 | 43113.9 |
| bifunctional chorismate mutase/prephenate dehydrogenase | EC382_RS19245 | Not Available | Negative | 4056182 - 4057303 | 42000.9 |
| 3-deoxy-7-phosphoheptulonate synthase arof | EC382_RS19250 | Not Available | Negative | 4057314 - 4058384 | 38762.2 |
| duf2799 domain-containing protein | EC382_RS19255 | Not Available | Positive | 4058594 - 4058959 | 13174.3 |
| duf4154 domain-containing protein | EC382_RS19260 | Not Available | Positive | 4059109 - 4059627 | 18979.2 |
| diguanylate cyclase dgcn | EC382_RS19265 | Not Available | Positive | 4059617 - 4060843 | 45934.1 |
| ompa family protein | EC382_RS19270 | Not Available | Positive | 4060859 - 4061341 | 17259.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





