Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | EC382_RS19175 | Not Available | Negative | 4042190 - 4042912 | 27265.7 |
| hydroxyacylglutathione hydrolase | EC382_RS19180 | Not Available | Positive | 4042946 - 4043701 | 28435.9 |
| murein transglycosylase d | EC382_RS19185 | Not Available | Positive | 4043773 - 4045131 | 49420.3 |
| class i sam-dependent methyltransferase | EC382_RS19190 | Not Available | Negative | 4045179 - 4045802 | 23078.5 |
| endonuclease/exonuclease/phosphatase family protein | EC382_RS19195 | Not Available | Negative | 4045806 - 4046606 | 29993.4 |
| lysr family transcriptional regulator | EC382_RS19200 | Not Available | Positive | 4046847 - 4047761 | 33708.7 |
| 2,5-didehydrogluconate reductase dkgb | EC382_RS19205 | Not Available | Negative | 4047758 - 4048561 | 29444.3 |
| atp-dependent chaperone clpb | EC382_RS19210 | Not Available | Negative | 4048834 - 4051407 | 95590.8 |
| polyphenol oxidase | EC382_RS19215 | Not Available | Negative | 4051537 - 4052268 | 26299.3 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | EC382_RS19220 | Not Available | Negative | 4052265 - 4053245 | 37095.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





