Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system membrane subunit tssm | EC382_RS19120 | Not Available | Positive | 4032445 - 4035879 | 130899.0 |
| hypothetical protein | EC382_RS19125 | Not Available | Positive | 4035890 - 4037239 | 50846.7 |
| hcp family type vi secretion system effector | EC382_RS19130 | Not Available | Positive | 4037266 - 4037745 | 17883.2 |
| peptidoglycan-binding protein | EC382_RS19140 | Not Available | Positive | 4038066 - 4038662 | 22562.1 |
| hypothetical protein | EC382_RS19145 | Not Available | Positive | 4038665 - 4039114 | 17230.8 |
| hypothetical protein | EC382_RS19150 | Not Available | Positive | 4039258 - 4039467 | 8172.83 |
| hypothetical protein | EC382_RS19155 | Not Available | Negative | 4039593 - 4040393 | 30040.7 |
| Trna-asp | Not Available | Not Available | Positive | 4040721 - 4040797 | Not Available |
| dna polymerase iii subunit epsilon | EC382_RS19165 | Not Available | Negative | 4040930 - 4041661 | 27100.5 |
| ribonuclease hi | EC382_RS19170 | Not Available | Positive | 4041726 - 4042193 | 17597.9 |
Pathways
514 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





