Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | EC382_RS19070 | Not Available | Positive | 4020154 - 4020567 | 15494.0 |
| type vi secretion system baseplate subunit tssf | EC382_RS19075 | Not Available | Positive | 4020571 - 4022421 | 71222.1 |
| type vi secretion system baseplate subunit tssg | EC382_RS19080 | Not Available | Positive | 4022385 - 4023467 | 40247.1 |
| type vi secretion system-associated fha domain protein tagh | EC382_RS19085 | Not Available | Positive | 4023492 - 4024772 | 47349.7 |
| type vi secretion system lipoprotein tssj | EC382_RS19090 | Not Available | Positive | 4024769 - 4025293 | 19440.1 |
| type vi secretion system baseplate subunit tssk | EC382_RS19095 | Not Available | Positive | 4025296 - 4026627 | 49914.7 |
| dotu family type iv/vi secretion system protein | EC382_RS19100 | Not Available | Positive | 4026632 - 4027393 | 29387.8 |
| type vi secretion system atpase tssh | EC382_RS19105 | Not Available | Positive | 4027402 - 4030176 | 101340.0 |
| type vi secretion system-associated protein tago | EC382_RS19110 | Not Available | Positive | 4030173 - 4030916 | 26452.8 |
| type vi secretion system protein tssa | EC382_RS19115 | Not Available | Positive | 4030921 - 4032336 | 52438.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





