Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 628109 SAMN10334465-rid9467093.guided.203 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1348096 bp
Thymine Count
1334145 bp
Guanine Count
1348628 bp
Cytosine Count
1382533 bp
Genome Length
5442379 bp
Protein-coding Genes
4885 genes
Non-Coding Genes
342 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EC382_RS18920 | Not Available | Positive | 3991479 - 3992105 | 23644.4 |
| septal ring assembly protein zapb | EC382_RS18925 | Not Available | Negative | 3992144 - 3992389 | 9635.4 |
| glycerol uptake facilitator protein glpf | EC382_RS18930 | Not Available | Positive | 3992815 - 3993660 | 29781.7 |
| glycerol kinase glpk | EC382_RS18935 | Not Available | Positive | 3993683 - 3995191 | 56233.9 |
| class ii fructose-bisphosphatase | EC382_RS18940 | Not Available | Positive | 3995421 - 3996431 | 35884.6 |
| ferredoxin--nadp(+) reductase | EC382_RS18945 | Not Available | Positive | 3996528 - 3997274 | 27672.4 |
| universal stress protein uspd | EC382_RS18950 | Not Available | Negative | 3997279 - 3997707 | 16276.0 |
| duf406 domain-containing protein | EC382_RS18955 | Not Available | Negative | 3997734 - 3998033 | 10746.7 |
| duf805 domain-containing protein | EC382_RS18960 | Not Available | Negative | 3998245 - 3998685 | 16542.6 |
| yiiq family protein | EC382_RS18965 | Not Available | Positive | 3998786 - 3999385 | 21736.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





